Merge branch 'stable-5.10' into stable-5.11

* stable-5.10:
  Add missing since tag for SshTestHarness#publicKey2
  Silence API errors
  Prevent infinite loop rescanning the pack list on
PackMismatchException
  Remove blank in maven.config

Migrated "Prevent infinite loop rescanning the pack list on
PackMismatchException" to refactoring done in
https://git.eclipse.org/r/q/topic:restore-preserved-packs

Change-Id: I0fb77bb9b498d48d5da88a93486b99bf8121e3bd
diff --git a/.mvn/maven.config b/.mvn/maven.config
index ebbe288..3944d88 100644
--- a/.mvn/maven.config
+++ b/.mvn/maven.config
@@ -1 +1 @@
--T 1C
+-T1C
diff --git a/org.eclipse.jgit.archive/.settings/.api_filters b/org.eclipse.jgit.archive/.settings/.api_filters
deleted file mode 100644
index f4a934a..0000000
--- a/org.eclipse.jgit.archive/.settings/.api_filters
+++ /dev/null
@@ -1,11 +0,0 @@
-<?xml version="1.0" encoding="UTF-8" standalone="no"?>
-<component id="org.eclipse.jgit.archive" version="2">
-    <resource path="src/org/eclipse/jgit/archive/BaseFormat.java" type="org.eclipse.jgit.archive.BaseFormat">
-        <filter id="336658481">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.archive.BaseFormat"/>
-                <message_argument value="COMPRESSION_LEVEL"/>
-            </message_arguments>
-        </filter>
-    </resource>
-</component>
diff --git a/org.eclipse.jgit.junit.ssh/.settings/.api_filters b/org.eclipse.jgit.junit.ssh/.settings/.api_filters
new file mode 100644
index 0000000..44c9dfa
--- /dev/null
+++ b/org.eclipse.jgit.junit.ssh/.settings/.api_filters
@@ -0,0 +1,25 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<component id="org.eclipse.jgit.junit.ssh" version="2">
+    <resource path="src/org/eclipse/jgit/junit/ssh/SshTestHarness.java" type="org.eclipse.jgit.junit.ssh.SshTestHarness">
+        <filter id="336658481">
+            <message_arguments>
+                <message_argument value="org.eclipse.jgit.junit.ssh.SshTestHarness"/>
+                <message_argument value="publicKey2"/>
+    </resource>
+    <resource path="META-INF/MANIFEST.MF">
+        <filter id="923795461">
+            <message_arguments>
+                <message_argument value="5.11.2"/>
+                <message_argument value="5.10.0"/>
+            </message_arguments>
+        </filter>
+    </resource>
+    <resource path="src/org/eclipse/jgit/junit/ssh/SshTestBase.java" type="org.eclipse.jgit.junit.ssh.SshTestBase">
+        <filter id="338792546">
+            <message_arguments>
+                <message_argument value="org.eclipse.jgit.junit.ssh.SshTestBase"/>
+                <message_argument value="testSshWithConfig()"/>
+            </message_arguments>
+        </filter>
+    </resource>
+</component>
diff --git a/org.eclipse.jgit.junit.ssh/src/org/eclipse/jgit/junit/ssh/SshTestHarness.java b/org.eclipse.jgit.junit.ssh/src/org/eclipse/jgit/junit/ssh/SshTestHarness.java
index 90d981b..a28d5eb 100644
--- a/org.eclipse.jgit.junit.ssh/src/org/eclipse/jgit/junit/ssh/SshTestHarness.java
+++ b/org.eclipse.jgit.junit.ssh/src/org/eclipse/jgit/junit/ssh/SshTestHarness.java
@@ -76,6 +76,9 @@
 
 	protected File publicKey1;
 
+	/**
+	 * @since 5.10
+	 */
 	protected File publicKey2;
 
 	protected SshTestGitServer server;
diff --git a/org.eclipse.jgit/.settings/.api_filters b/org.eclipse.jgit/.settings/.api_filters
deleted file mode 100644
index d389ac5..0000000
--- a/org.eclipse.jgit/.settings/.api_filters
+++ /dev/null
@@ -1,57 +0,0 @@
-<?xml version="1.0" encoding="UTF-8" standalone="no"?>
-<component id="org.eclipse.jgit" version="2">
-    <resource path="src/org/eclipse/jgit/lib/ConfigConstants.java" type="org.eclipse.jgit.lib.ConfigConstants">
-        <filter id="338755678">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.lib.ConfigConstants"/>
-                <message_argument value="CONFIG_REFSTORAGE_REFTREE"/>
-            </message_arguments>
-        </filter>
-    </resource>
-    <resource path="src/org/eclipse/jgit/revwalk/ObjectWalk.java" type="org.eclipse.jgit.revwalk.ObjectWalk">
-        <filter id="421654647">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.revwalk.ObjectWalk"/>
-                <message_argument value="createObjectReachabilityChecker()"/>
-            </message_arguments>
-        </filter>
-    </resource>
-    <resource path="src/org/eclipse/jgit/revwalk/RevWalk.java" type="org.eclipse.jgit.revwalk.RevWalk">
-        <filter id="421654647">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.revwalk.RevWalk"/>
-                <message_argument value="createReachabilityChecker()"/>
-            </message_arguments>
-        </filter>
-    </resource>
-    <resource path="src/org/eclipse/jgit/util/FS.java" type="org.eclipse.jgit.util.FS">
-        <filter id="338792546">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.util.FS"/>
-                <message_argument value="internalRunHookIfPresent(Repository, String, String[], PrintStream, PrintStream, String)"/>
-            </message_arguments>
-        </filter>
-        <filter id="338792546">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.util.FS"/>
-                <message_argument value="runHookIfPresent(Repository, String, String[], PrintStream, PrintStream, String)"/>
-            </message_arguments>
-        </filter>
-    </resource>
-    <resource path="src/org/eclipse/jgit/util/FS_POSIX.java" type="org.eclipse.jgit.util.FS_POSIX">
-        <filter id="338792546">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.util.FS_POSIX"/>
-                <message_argument value="runHookIfPresent(Repository, String, String[], PrintStream, PrintStream, String)"/>
-            </message_arguments>
-        </filter>
-    </resource>
-    <resource path="src/org/eclipse/jgit/util/FS_Win32_Cygwin.java" type="org.eclipse.jgit.util.FS_Win32_Cygwin">
-        <filter id="338792546">
-            <message_arguments>
-                <message_argument value="org.eclipse.jgit.util.FS_Win32_Cygwin"/>
-                <message_argument value="runHookIfPresent(Repository, String, String[], PrintStream, PrintStream, String)"/>
-            </message_arguments>
-        </filter>
-    </resource>
-</component>
diff --git a/org.eclipse.jgit/src/org/eclipse/jgit/errors/PackMismatchException.java b/org.eclipse.jgit/src/org/eclipse/jgit/errors/PackMismatchException.java
index 44b8e01..7a2c70d 100644
--- a/org.eclipse.jgit/src/org/eclipse/jgit/errors/PackMismatchException.java
+++ b/org.eclipse.jgit/src/org/eclipse/jgit/errors/PackMismatchException.java
@@ -18,6 +18,8 @@
 public class PackMismatchException extends IOException {
 	private static final long serialVersionUID = 1L;
 
+	private boolean permanent;
+
 	/**
 	 * Construct a pack modification error.
 	 *
@@ -27,4 +29,31 @@
 	public PackMismatchException(String why) {
 		super(why);
 	}
+
+	/**
+	 * Set the type of the exception
+	 *
+	 * @param permanent
+	 *            whether the exception is considered permanent
+	 * @since 5.9.1
+	 */
+	public void setPermanent(boolean permanent) {
+		this.permanent = permanent;
+	}
+
+	/**
+	 * Check if this is a permanent problem
+	 *
+	 * @return if this is a permanent problem and repeatedly scanning the
+	 *         packlist couldn't fix it
+	 * @since 5.9.1
+	 */
+	public boolean isPermanent() {
+		return permanent;
+	}
+
+	@Override
+	public String toString() {
+		return super.toString() + ", permanent: " + permanent; //$NON-NLS-1$
+	}
 }
diff --git a/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/ObjectDirectory.java b/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/ObjectDirectory.java
index 627facc..a3ce315 100644
--- a/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/ObjectDirectory.java
+++ b/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/ObjectDirectory.java
@@ -30,6 +30,7 @@
 import java.util.Set;
 import java.util.concurrent.atomic.AtomicReference;
 
+import org.eclipse.jgit.errors.PackMismatchException;
 import org.eclipse.jgit.internal.JGitText;
 import org.eclipse.jgit.internal.storage.pack.ObjectToPack;
 import org.eclipse.jgit.internal.storage.pack.PackExt;
@@ -350,7 +351,8 @@
 	}
 
 	private ObjectLoader openPackedFromSelfOrAlternate(WindowCursor curs,
-			AnyObjectId objectId, Set<AlternateHandle.Id> skips) {
+			AnyObjectId objectId, Set<AlternateHandle.Id> skips)
+			throws PackMismatchException {
 		ObjectLoader ldr = openPackedObject(curs, objectId);
 		if (ldr != null) {
 			return ldr;
@@ -386,7 +388,8 @@
 		return null;
 	}
 
-	ObjectLoader openPackedObject(WindowCursor curs, AnyObjectId objectId) {
+	ObjectLoader openPackedObject(WindowCursor curs, AnyObjectId objectId)
+			throws PackMismatchException {
 		return packed.open(curs, objectId);
 	}
 
@@ -421,7 +424,8 @@
 	}
 
 	private long getPackedSizeFromSelfOrAlternate(WindowCursor curs,
-			AnyObjectId id, Set<AlternateHandle.Id> skips) {
+			AnyObjectId id, Set<AlternateHandle.Id> skips)
+			throws PackMismatchException {
 		long len = packed.getSize(curs, id);
 		if (0 <= len) {
 			return len;
diff --git a/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/PackDirectory.java b/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/PackDirectory.java
index 73745d8..73f6b4f 100644
--- a/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/PackDirectory.java
+++ b/org.eclipse.jgit/src/org/eclipse/jgit/internal/storage/file/PackDirectory.java
@@ -59,6 +59,8 @@
 	private final static Logger LOG = LoggerFactory
 			.getLogger(PackDirectory.class);
 
+	private static final int MAX_PACKLIST_RESCAN_ATTEMPTS = 5;
+
 	private static final PackList NO_PACKS = new PackList(FileSnapshot.DIRTY,
 			new Pack[0]);
 
@@ -201,9 +203,11 @@
 		return true;
 	}
 
-	ObjectLoader open(WindowCursor curs, AnyObjectId objectId) {
+	ObjectLoader open(WindowCursor curs, AnyObjectId objectId)
+			throws PackMismatchException {
 		PackList pList;
 		do {
+			int retries = 0;
 			SEARCH: for (;;) {
 				pList = packList.get();
 				for (Pack p : pList.packs) {
@@ -215,6 +219,7 @@
 					} catch (PackMismatchException e) {
 						// Pack was modified; refresh the entire pack list.
 						if (searchPacksAgain(pList)) {
+							retries = checkRescanPackThreshold(retries, e);
 							continue SEARCH;
 						}
 					} catch (IOException e) {
@@ -227,9 +232,11 @@
 		return null;
 	}
 
-	long getSize(WindowCursor curs, AnyObjectId id) {
+	long getSize(WindowCursor curs, AnyObjectId id)
+			throws PackMismatchException {
 		PackList pList;
 		do {
+			int retries = 0;
 			SEARCH: for (;;) {
 				pList = packList.get();
 				for (Pack p : pList.packs) {
@@ -242,6 +249,7 @@
 					} catch (PackMismatchException e) {
 						// Pack was modified; refresh the entire pack list.
 						if (searchPacksAgain(pList)) {
+							retries = checkRescanPackThreshold(retries, e);
 							continue SEARCH;
 						}
 					} catch (IOException e) {
@@ -255,8 +263,9 @@
 	}
 
 	void selectRepresentation(PackWriter packer, ObjectToPack otp,
-			WindowCursor curs) {
+			WindowCursor curs) throws PackMismatchException {
 		PackList pList = packList.get();
+		int retries = 0;
 		SEARCH: for (;;) {
 			for (Pack p : pList.packs) {
 				try {
@@ -268,6 +277,7 @@
 				} catch (PackMismatchException e) {
 					// Pack was modified; refresh the entire pack list.
 					//
+					retries = checkRescanPackThreshold(retries, e);
 					pList = scanPacks(pList);
 					continue SEARCH;
 				} catch (IOException e) {
@@ -278,6 +288,15 @@
 		}
 	}
 
+	private int checkRescanPackThreshold(int retries, PackMismatchException e)
+			throws PackMismatchException {
+		if (retries++ > MAX_PACKLIST_RESCAN_ATTEMPTS) {
+			e.setPermanent(true);
+			throw e;
+		}
+		return retries;
+	}
+
 	private void handlePackError(IOException e, Pack p) {
 		String warnTmpl = null;
 		int transientErrorCount = 0;