Remove deprecated PatchApplier#applyPatch(InputStream)

Change-Id: I79923b95861af983b676d436938aaeebe8c5b658
diff --git a/org.eclipse.jgit/src/org/eclipse/jgit/patch/PatchApplier.java b/org.eclipse.jgit/src/org/eclipse/jgit/patch/PatchApplier.java
index cb6cc6e..23e09b9 100644
--- a/org.eclipse.jgit/src/org/eclipse/jgit/patch/PatchApplier.java
+++ b/org.eclipse.jgit/src/org/eclipse/jgit/patch/PatchApplier.java
@@ -41,7 +41,6 @@
 
 import org.eclipse.jgit.annotations.Nullable;
 import org.eclipse.jgit.api.errors.FilterFailedException;
-import org.eclipse.jgit.api.errors.PatchFormatException;
 import org.eclipse.jgit.attributes.Attribute;
 import org.eclipse.jgit.attributes.Attributes;
 import org.eclipse.jgit.attributes.FilterCommand;
@@ -290,32 +289,6 @@ private void addErrorWithGitConflict(String msg, String oldFileName,
 	/**
 	 * Applies the given patch
 	 *
-	 * @param patchInput
-	 *            the patch to apply.
-	 * @return the result of the patch
-	 * @throws PatchFormatException
-	 *             if the patch cannot be parsed
-	 * @throws IOException
-	 *             if the patch read fails
-	 * @deprecated use {@link #applyPatch(Patch)} instead
-	 */
-	@Deprecated
-	public Result applyPatch(InputStream patchInput)
-			throws PatchFormatException, IOException {
-		Patch p = new Patch();
-		try (InputStream inStream = patchInput) {
-			p.parse(inStream);
-
-			if (!p.getErrors().isEmpty()) {
-				throw new PatchFormatException(p.getErrors());
-			}
-		}
-		return applyPatch(p);
-	}
-
-	/**
-	 * Applies the given patch
-	 *
 	 * @param p
 	 *            the patch to apply.
 	 * @return the result of the patch